We are interested in algorithmic and statistical problems in Bioinformatics, particularly in the areas of proteomic, evolutionary genomics and functional genomics.

Research topics in evolutioanry/comparative genomics:

• Segmental duplications in human (details) and other eukaryotic genomes;
• Discovery of LTR retrotransposons (details) and the other mobile genetic elements in eukaryotic genomes;

Fragment assembly in DNA sequencing (details)

Research topics in proteomics and glycomics:

• Predictin fragmentary mass spectra of peptides using machine learning approaches (details);
• Automatics interpretation of glycans (details come soon; a preliminary report);
• Computational identification of glycopeptides from tandem mass spectra. (details come soon!);

Analysis of ChIP-on-chip data (details come soon!)