/usr/local/bio/bin/scan COGSET COG0001.fas.sn 
 : 0
C: 1564 (0.010740)
G: 12042 (0.082692)
A: 13761 (0.094496)
S: 7470 (0.051296)
T: 7490 (0.051433)
N: 4965 (0.034094)
D: 7775 (0.053391)
E: 10109 (0.069418)
Q: 4241 (0.029123)
K: 7474 (0.051324)
R: 7922 (0.054400)
H: 3543 (0.024330)
W: 1668 (0.011454)
Y: 4695 (0.032240)
F: 5957 (0.040906)
V: 10833 (0.074390)
I: 9308 (0.063918)
L: 14268 (0.097978)
M: 3429 (0.023547)
P: 7111 (0.048831)

static double pdbfreq[21] = { 0.000, /** X **/
		0.01074, /** C **/
		0.08269, /** G **/
		0.09450, /** A **/
		0.05130, /** S **/
		0.05143, /** T **/
		0.03409, /** N **/
		0.05339, /** D **/
		0.06942, /** E **/
		0.02912, /** Q **/
		0.05132, /** K **/
		0.05440, /** R **/
		0.02433, /** H **/
		0.01145, /** W **/
		0.03224, /** Y **/
		0.04091, /** F **/
		0.07439, /** V **/
		0.06392, /** I **/
		0.09798, /** L **/
		0.02355, /** M **/
		0.04883  /** P **/ };

average length = 372.4
Distribution of -log10(E-values):
  ( '=' is 5 counts. )

   -5.00 : 2        |
   -4.00 : 37       |=======
   -3.00 : 225      |=============================================
   -2.00 : 77       |===============
   -1.00 : 15       |===
    0.00 : 0        |
    1.00 : 0        |
    2.00 : 0        |
    3.00 : 0        |
    4.00 : 1        |
    5.00 : 0        |
    6.00 : 0        |
    7.00 : 0        |
    8.00 : 2        |
    9.00 : 2        |
   10.00 : 1        |
   11.00 : 4        |
   12.00 : 5        |=
   13.00 : 20       |====
   14.00 : 0        |
   total : 391     

    mean = -1.03286
   stdev = 4.21357
   range = -4.99701 .. 13.3453

[13.35] BS_gsaB, 392 bases, 5A18BD5E checksum.
 15.9:   80  AMDKVRFVNS GTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSD LVLVAAGSGP  112


[13.31] MTH228, 420 bases, 5B0135E4 checksum.
 15.9:  111  CAEMVRFTNS GTEATMAAVRLARAFTGRDRIVKFEGSYHGAHD YVLVRPGSGA  143


[13.31] aq_816, 424 bases, B8401DC checksum.
 15.9:  114  SVEKVRFVNS GTEATMSAVRLARGVTGRKYIVKFEGCYHGHYD SLLVSAGSGV  146


[13.31] hemL, 426 bases, 589FDC38 checksum.
 15.9:  115  TMDMVRMVNS GTEATMSAIRLARGFTGRDKIIKFEGCYHGHAD CLLVKAGSGA  147


[13.31] ZhemL, 426 bases, ECF1D76B checksum.
 15.9:  115  TMDMVRMVNS GTEATMSAIRLARGFTGRDKIIKFEGCYHGHAD CLLVKAGSGA  147


[13.30] PA3977, 427 bases, 57A5A8A checksum.
 15.9:  115  SMEMVRMVSS GTEATMSAIRLARGYTGRDSIIKFEGCYHGHSD SLLVKAGSGA  147


[13.30] NMB1864, 427 bases, A5E94C76 checksum.
 15.9:  115  SVERLRLVSS GTEATMTAIRLARGFTGRDKIIKFEGCYHGHSD SLLVKAGSGL  147


[13.30] NMA0592, 427 bases, D2C42123 checksum.
 15.9:  115  SVERLRLVSS GTEATMTAIRLARGFTGRDKIIKFEGCYHGHSD SLLVKAGSGL  147


[13.30] PM0462, 427 bases, D3682D19 checksum.
 15.9:  115  SIDMVRMVSS GTEATMSAIRLARGYTKRDKIIKFEGCYHGHAD SLLVKAGSGA  147


[13.30] BH3043, 429 bases, DE7774C1 checksum.
 15.9:  118  SIEVVRMVNS GTEATMSALRLARGYTGRNKILKFEGCYHGHGD SLLIKAGSGV  150


[13.30] BS_hemL, 430 bases, 630079F2 checksum.
 15.9:  118  SVEIVRMVSS GTEATMSALRLARGYTGRNKILKFEGCYHGHGD SLLIKAGSGV  150


[13.30] VC0626, 432 bases, 5C3D3243 checksum.
 15.9:  115  SMEQLRMVNS GTEATMSAIRLARGYTGRDKIIKFEGCYHGHAD SLLVKAGSGA  147


[13.30] APE2299, 432 bases, 42ACCC96 checksum.
 15.9:  119  RGGMIRFVNS GTEATMTAIRLARGYTGRDLILKFDGCYHGSHD AVLVAAGSAA  151


[13.29] BH0943, 437 bases, 152A81E checksum.
 15.9:  118  SLEKVRFVNS GTEAVMTTIRVARAYTGRDKIIKFAGCYHGHSD LVLVAAGSGP  150


[13.29] CPn0138, 440 bases, E978DD8F checksum.
 15.9:  121  KEHKIRFVSS GTEATMTAVRLARGITNRSIIIKFIGGYHGHAD TLLGGISTTE  153


[13.29] XF2302, 444 bases, FBCAD910 checksum.
 15.9:  117  SCDMVRMVNS GTEATLSAIRLARGATGRNHIVKFEGCYHGHGD SFLVKGGSGM  149


[13.29] MJ0603, 445 bases, 987D29BC checksum.
 15.9:  135  CAEMVRFVNS GTEATMSAIRLARGVTGRKKIIKFDGAYHGAHD YVLVKSGSGA  167


[13.28] ML2414, 446 bases, C7DBB400 checksum.
 15.9:  129  PVERIRLVNS GTEATMSAVRLARGFTGRTKIIKFSGCYHGHVD ALLADAGSGV  161


[13.28] DR0555, 455 bases, 6207C5CE checksum.
 15.9:  133  GAERVRFVSS GTEATMSALRLARGYTGRKFIVKFRGNYHGHAD GLLVEAGSGL  165


[13.27] Rv0524, 462 bases, D2045BA9 checksum.
 15.9:  129  PVERIRLVNS GTEATMSAVRLARGFTGRAKIVKFSGCYHGHVD ALLADAGSGV  161


[12.76] APE2130, 394 bases, D7048E6A checksum.
 15.4:   81  MYDKVLFTNS GSEAVMMAMRLARAYTGRDVVVKFDGNYHGWHD YSIYNIKNPA  113


[12.73] CT210, 422 bases, D8583AD checksum.
 15.3:  114  TNYKIRFMST GSEATMTAVRLARGITGRPIIIKFLGCYHGHAD TFLQEKPFSH  146


[12.51] Cj0853c, 424 bases, 72C9DDB3 checksum.
 15.1:  114  HLEKIRFVSS GTEATMSAIRLARGFTKKDKILKFEGCYHGHSD SLLVSAGSGA  146


[12.35] TVN0635, 420 bases, FAFFA64 checksum.
 14.9:  111  NIEMMRFTNS GTEATMHAIRLARAITGRKLIVKMEGGFHGAHD YSLIKSGSGT  143


[12.35] Ta0571, 426 bases, 7E4FB4E5 checksum.
 14.9:  116  NIEMMRFTNS GTEATMHAIRLARAYTGRSIIVKMEGGFHGAHD YSLIRSGSGT  148


[11.80] sll0017, 411 bases, B6684C06 checksum.
 14.4:  101  SIEMVRFVNS GTEACMSVLRLMRAFTGREKIIKFEGCYHGHAD MFLVKAGSGV  133


[11.35] jhp0291, 430 bases, 66A477AA checksum.
 13.9:  117  GLDKVRLVNS GTEATMSAIRLARAYSQKDDLIKFEGCYHGHSD SLLVKAGSGC  149


[11.35] HP0306, 430 bases, 735BDCCF checksum.
 13.9:  117  GLDKVRLVSS GTEATMSAIRLARAYSQKDDLIKFEGCYHGHSD SLLVKAGSGC  149


[11.26] AF1241, 418 bases, 3DBAE5EC checksum.
 13.8:  114  SMEMLRFVNT GSEATMAALRVARGFTGRDKIVKVEGSFHGAHD AVLVKAGSGA  146


[10.02] VNG2326G, 445 bases, 79A2DF2 checksum.
 12.6:  116  SVELLRFVNS GTEATVSAVRLARGYTGRNKIVVMQGGYHGAQE STLVEGDADH  148


[9.23] BH2941, 461 bases, 80653749 checksum.
 11.8:  130  SMERLRYTNS GTEATLLAMRIAQAYTNKKRIAKFEGHYHGGYN DVLYSVSPTL  162


[9.01] PA5523, 450 bases, 58D8C00C checksum.
 11.6:  124  GLPFWQVATT ATDANRFVLRWARAITGRKVVLVFDGCYHGTVD DTLVRCRDGR  156


[9.00] mll5149, 460 bases, A66DC8D4 checksum.
 11.6:  146  GLPFWQIATT ATDANRFSLRVARAVTGREKILVFNGCYHGSVD ETMVRLIGGK  178


[8.16] CC3139, 466 bases, 1A56CD83 checksum.
 10.8:  152  GLPLWQAATT ASDANRAAIRWARAVTGRPVILVFDGCYHGMVD DAFVVLKDGA  184


[4.89] PA4088, 461 bases, A1683F7 checksum.
  7.5:  139  GLPYWQVTTS ATDANRFVLRLCRMLSGRDKVVVFNCNYHGSVD ESQVEFDAAG  171


	time: 0 seconds (0.00 minutes)