Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1127424309-18286-147280582911.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 2,865,032 sequences; 982,323,851 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Results of PSI-Blast iteration 1 Taxonomy reports Query= FRAGMENT_OF_CERTAIN_DROSOPHILA_PROTEIN (600 letters)
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Score E Sequences producing significant alignments: (Bits) Value gi|22831715|gb|AAF46001.2| CG6824-PB, isoform B [Drosophila m... 679 0.0 gi|21425693|emb|CAD23206.1| shavenbaby [Drosophila melanogaster] 679 0.0 gi|22831716|gb|AAF46003.2| CG6824-PC, isoform C [Drosophila m... 522 2e-146 gi|18857871|emb|CAD23207.1| ovoA protein [Drosophila melanogaste 522 2e-146 gi|1911865|gb|AAB50918.1| TFIIIA-like zinc finger transcripti... 435 3e-120 gi|7716752|gb|AAF68526.1| ovo protein [Drosophila simulans] 241 5e-62 gi|7716764|gb|AAF68532.1| ovo protein [Drosophila simulans] >... 241 5e-62 gi|7716766|gb|AAF68533.1| ovo protein [Drosophila simulans] 241 5e-62 gi|27656718|emb|CAD59739.2| zinc finger transcription factor [Ba 229 2e-58 gi|27656723|emb|CAD59740.1| zinc finger transcription factor ... 229 3e-58 gi|22831717|gb|AAF46002.2| CG6824-PA, isoform A [Drosophila m... 132 3e-29 gi|4456074|emb|CAB36921.1| ovo protein [Drosophila melanogaster] 132 4e-29 gi|520527|gb|AAB60216.1| Ovo-1028aa [Drosophila melanogaster] 132 4e-29 gi|1911866|gb|AAB50919.1| TFIIIA-like zinc finger transcripti... 71.6 8e-11 gi|27656721|emb|CAD60248.1| zinc finger transcription factor [Ba 68.2 8e-10 gi|27656725|emb|CAD59741.1| zinc finger transcription factor ... 67.8 1e-09 Sequences with E-value WORSE than threshold gi|50548483|ref|XP_501711.1| hypothetical protein [Yarrowia l... 42.4 0.048 gi|50290505|ref|XP_447684.1| unnamed protein product [Candida... 42.4 0.054 gi|50290763|ref|XP_447814.1| unnamed protein product [Candida... 41.2 0.12 gi|19908872|gb|AAM03037.1| unknown; OrfK [Helicobacter pylori] 41.2 0.12 gi|74022557|ref|ZP_00693139.1| PE-PGRS family protein [Rhodof... 39.7 0.33 gi|50553410|ref|XP_504116.1| hypothetical protein [Yarrowia l... 38.9 0.61 gi|160165|gb|AAA70381.1| circumsporozoite protein 38.1 0.97 gi|1405387|gb|AAB03510.1| GLH-2 [Caenorhabditis elegans] >gi|... 37.4 1.7 gi|47230717|emb|CAF99910.1| unnamed protein product [Tetraodon n 37.0 1.9 gi|66526714|ref|XP_624482.1| PREDICTED: similar to ENSANGP000000 36.6 2.6 gi|28972035|dbj|BAC65471.1| mKIAA0023 protein [Mus musculus] 35.8 4.7 gi|49653505|emb|CAG85884.1| unnamed protein product [Debaryom... 35.8 4.9
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Sep 21, 2005 6:26 AM Number of letters in database: 982,323,851 Number of sequences in database: 2,865,032 Lambda K H 0.307 0.127 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2865032 Number of Hits to DB: 283985173 Number of extensions: 16095140 Number of successful extensions: 351805 Number of sequences better than 10: 3713 Number of HSP's better than 10 without gapping: 1493 Number of HSP's gapped: 271305 Number of HSP's successfully gapped: 8890 Number of extra gapped extensions for HSPs above 10: 199014 Length of query: 600 Length of database: 982323851 Length adjustment: 134 Effective length of query: 466 Effective length of database: 598409563 Effective search space: 278858856358 Effective search space used: 278858856358 T: 11 A: 40 X1: 16 (7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (20.8 bits) S2: 79 (35.0 bits)