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| The name of your search is: | default |
| Search for sites by WeightMatrix library: | matrixTFP60.lib | | Sequence file: | default.seq | | Matrix groups: | all | | Cut-offs: | to minimize false positive matches |
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| Scanning sequence ID: iCEN1; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
V$EVI1_04 551 (+) 1.000 0.846 ggaaaataaAAGATa Evi-1
| Scanning sequence ID: iCEN10; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
I$BRCZ4_01 42 (-) 1.000 0.967 tttttTTTATttt BR-C Z4
V$HNF4_01 58 (-) 1.000 0.890 gtaggttCTTTGgccatcc HNF-4
V$GATA2_02 185 (-) 1.000 1.000 tcTTATCtct GATA-2
V$GATA2_03 185 (-) 1.000 1.000 tcTTATCtct GATA-2
I$BRCZ4_01 232 (+) 1.000 0.975 taaATAAAtaaaa BR-C Z4
V$FOXJ2_02 240 (-) 0.948 0.958 taaaatATTGTtgt FOXJ2
| Scanning sequence ID: iCEN11; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
V$PAX6_01 6 (+) 0.960 0.800 gatatTTACGgttcaagagaa Pax-6
V$CDPCR1_01 148 (-) 0.929 0.924 gctaTCAATt CDP CR1
| Scanning sequence ID: iCEN12; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
B$CRP_C 336 (-) 0.859 0.774 aaacttgaaaataaCCACAaaactta CRP
| Scanning sequence ID: iCEN13; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
V$AP1_Q4 230 (-) 1.000 0.995 ccttAGTCAct AP-1
V$HNF3B_01 235 (+) 1.000 0.962 gtcacTATTTatttt HNF-3beta
V$MYOGNF1_01 474 (-) 0.929 0.785 tgttgtcactctTCCAAtgggcacctgta myogenin
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NF-1
V$FOXJ2_02 530 (+) 0.948 0.956 aaaACAATattttt FOXJ2
V$CDPCR1_01 813 (-) 0.929 0.926 ccaaTCAATg CDP CR1
Total sequences length=2653
Total number of sites found=15
Frequency of sites per nucleotide=0.005654